Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-4 | -9.924e+00 | 0.0178 | 39.0 | 4.41% | 1063.3 | 2.20% | motif file (matrix) |
svg |
2 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -9.728e+00 | 0.0178 | 73.0 | 8.26% | 2479.5 | 5.13% | motif file (matrix) |
svg |
3 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.360e+00 | 0.0284 | 54.0 | 6.11% | 1770.0 | 3.66% | motif file (matrix) |
svg |
4 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -8.343e+00 | 0.0284 | 73.0 | 8.26% | 2598.8 | 5.38% | motif file (matrix) |
svg |
5 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.648e+00 | 0.0347 | 66.0 | 7.47% | 2350.4 | 4.86% | motif file (matrix) |
svg |
6 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.819e+00 | 0.0663 | 61.0 | 6.90% | 2204.4 | 4.56% | motif file (matrix) |
svg |
7 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -6.549e+00 | 0.0744 | 41.0 | 4.64% | 1352.6 | 2.80% | motif file (matrix) |
svg |
8 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -6.235e+00 | 0.0892 | 38.0 | 4.30% | 1248.5 | 2.58% | motif file (matrix) |
svg |
9 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -6.217e+00 | 0.0892 | 30.0 | 3.39% | 916.8 | 1.90% | motif file (matrix) |
svg |
10 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -6.153e+00 | 0.0892 | 25.0 | 2.83% | 719.5 | 1.49% | motif file (matrix) |
svg |
11 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.907e+00 | 0.0900 | 26.0 | 2.94% | 773.2 | 1.60% | motif file (matrix) |
svg |
12 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.881e+00 | 0.0900 | 35.0 | 3.96% | 1147.2 | 2.37% | motif file (matrix) |
svg |
13 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -5.746e+00 | 0.0900 | 35.0 | 3.96% | 1157.7 | 2.39% | motif file (matrix) |
svg |
14 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-2 | -5.554e+00 | 0.1007 | 9.0 | 1.02% | 165.9 | 0.34% | motif file (matrix) |
svg |
15 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -5.528e+00 | 0.1007 | 59.0 | 6.67% | 2244.9 | 4.64% | motif file (matrix) |
svg |
16 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.240e+00 | 0.1206 | 19.0 | 2.15% | 533.2 | 1.10% | motif file (matrix) |
svg |
17 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -5.204e+00 | 0.1206 | 50.0 | 5.66% | 1867.2 | 3.86% | motif file (matrix) |
svg |
18 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.167e+00 | 0.1206 | 12.0 | 1.36% | 276.8 | 0.57% | motif file (matrix) |
svg |
19 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.088e+00 | 0.1206 | 18.0 | 2.04% | 502.7 | 1.04% | motif file (matrix) |
svg |
20 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -5.059e+00 | 0.1206 | 12.0 | 1.36% | 280.8 | 0.58% | motif file (matrix) |
svg |
21 |
| ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.048e+00 | 0.1206 | 41.0 | 4.64% | 1477.5 | 3.06% | motif file (matrix) |
svg |
22 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.996e+00 | 0.1206 | 89.0 | 10.07% | 3731.9 | 7.72% | motif file (matrix) |
svg |
23 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -4.945e+00 | 0.1206 | 28.0 | 3.17% | 919.7 | 1.90% | motif file (matrix) |
svg |
24 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -4.865e+00 | 0.1206 | 63.0 | 7.13% | 2507.4 | 5.19% | motif file (matrix) |
svg |
25 |
| PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.754e+00 | 0.1254 | 29.0 | 3.28% | 976.5 | 2.02% | motif file (matrix) |
svg |
26 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -4.713e+00 | 0.1257 | 19.0 | 2.15% | 562.8 | 1.16% | motif file (matrix) |
svg |
27 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -4.666e+00 | 0.1269 | 5.0 | 0.57% | 69.1 | 0.14% | motif file (matrix) |
svg |
28 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -4.627e+00 | 0.1272 | 27.0 | 3.05% | 900.7 | 1.86% | motif file (matrix) |
svg |