Information for 4-AGTCTGCTCTGGG (Motif 8)

C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C G T C A A T C G G T C A A C T G A G T C C G T A A C T G C G T A A G T C A G C T
p-value:1e-10
log p-value:-2.364e+01
Information Content per bp:1.861
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.9 +/- 28.8bp
Average Position of motif in Background48.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGCTCTGGG
TWGTCTGV------
 A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTCTGCTCTGGG
VBSYGTCTGG------
 A C G T A C G T A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGCTCTGGG
CTGTCTGG------
 A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTCTGCTCTGGG-
GGGGCTYGKCTGGGA
 A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCTGCTCTGGG
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTCTGCTCTGGG----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

POL002.1_INR/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTGCTCTGGG
NNNANTGA------
 A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGTCTGCTCTGGG
GGTCTGGCAT---
 C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.48
Offset:-8
Orientation:reverse strand
Alignment:--------AGTCTGCTCTGGG
NTNNNAGGAGTCTCNTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--AGTCTGCTCTGGG
TGAGTCAGCA-----
 A C G T A C G T C T G A A C T G A C G T A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G C T A G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T