Information for 7-CGCAGCGCTGMGS (Motif 13)

A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G
Reverse Opposite:
A T G C A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C A C G T A T C G G T A C C T A G
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.5 +/- 26.7bp
Average Position of motif in Background54.4 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCAGCGCTGMGS--
-GCCGCGCAGTGCGT
 A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCGCTGMGS-
NCGCAGCGGGGGGTC
 A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGCAGCGCTGMGS
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGCAGCGCTGMGS
--CAGCC------
 A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCAGCGCTGMGS
CACAGN-------
 A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCGCTGMGS-
NCNCAGCGGGGGGTC
 A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCGCTGMGS-
DCHCAGCAGGRGGCC
 A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CGCAGCGCTGMGS-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCGCTGMGS
DCTCAGCAGG----
 A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CGCAGCGCTGMGS-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A G T C A C T G A T G C G T C A A C T G A G T C A C T G A G T C C A G T A T C G G T A C C T A G T A C G A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G