Information for 2-GGCCGCCTGC (Motif 10)

C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C
Reverse Opposite:
A T C G A T G C G T C A C T A G A T C G A T G C A C T G A C T G A T G C G T A C
p-value:1e-9
log p-value:-2.214e+01
Information Content per bp:1.850
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.75%
Number of Background Sequences with motif736.9
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets46.6 +/- 25.9bp
Average Position of motif in Background49.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCCGCCTGC--
SNGCACCTGCHS
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCGCCTGC--
CTGGCAGNCTGCCA
 A C G T A C G T C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCCGCCTGC-----
GGCCYCCTGCTGDGH
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCCGCCTGC-----
GACCCCCCGCTGTGC
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCGCCTGC
VBSYGTCTGG
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCCGCCTGC-
-NNCACCTGNN
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGCCGCCTGC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCGCCTGC---
ATTGCCTCAGGCAAT
 A C G T A C G T C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCGCCTGC----
GACCCCCCGCTGTG
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCCGCCTGC-
-GCCATCTGTT
 C A T G A T C G A G T C A G T C A T C G A T G C A G T C A C G T A T C G A T G C A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T