Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-18 | -4.299e+01 | 0.0000 | 39.0 | 4.74% | 357.7 | 0.74% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-16 | -3.810e+01 | 0.0000 | 59.0 | 7.18% | 938.3 | 1.93% | motif file (matrix) |
svg |
3 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-11 | -2.645e+01 | 0.0000 | 14.0 | 1.70% | 58.1 | 0.12% | motif file (matrix) |
svg |
4 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-6 | -1.448e+01 | 0.0000 | 62.0 | 7.54% | 1854.8 | 3.82% | motif file (matrix) |
svg |
5 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.355e+01 | 0.0001 | 33.0 | 4.01% | 754.4 | 1.55% | motif file (matrix) |
svg |
6 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-5 | -1.232e+01 | 0.0003 | 16.0 | 1.95% | 236.6 | 0.49% | motif file (matrix) |
svg |
7 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.181e+01 | 0.0004 | 16.0 | 1.95% | 246.9 | 0.51% | motif file (matrix) |
svg |
8 |
| ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.058e+01 | 0.0012 | 96.0 | 11.68% | 3697.3 | 7.62% | motif file (matrix) |
svg |
9 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.013e+01 | 0.0016 | 30.0 | 3.65% | 777.8 | 1.60% | motif file (matrix) |
svg |
10 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -9.202e+00 | 0.0037 | 24.0 | 2.92% | 588.4 | 1.21% | motif file (matrix) |
svg |
11 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.435e+00 | 0.0072 | 12.0 | 1.46% | 201.3 | 0.41% | motif file (matrix) |
svg |
12 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.423e+00 | 0.0072 | 19.0 | 2.31% | 434.4 | 0.90% | motif file (matrix) |
svg |
13 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -8.379e+00 | 0.0072 | 22.0 | 2.68% | 546.7 | 1.13% | motif file (matrix) |
svg |
14 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -8.162e+00 | 0.0074 | 128.0 | 15.57% | 5587.3 | 11.51% | motif file (matrix) |
svg |
15 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.925e+00 | 0.0088 | 25.0 | 3.04% | 682.2 | 1.41% | motif file (matrix) |
svg |
16 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.838e+00 | 0.0090 | 58.0 | 7.06% | 2141.7 | 4.41% | motif file (matrix) |
svg |
17 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -7.374e+00 | 0.0134 | 75.0 | 9.12% | 3005.2 | 6.19% | motif file (matrix) |
svg |
18 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-3 | -7.287e+00 | 0.0138 | 24.0 | 2.92% | 673.4 | 1.39% | motif file (matrix) |
svg |
19 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-3 | -7.236e+00 | 0.0138 | 31.0 | 3.77% | 967.9 | 1.99% | motif file (matrix) |
svg |
20 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -6.936e+00 | 0.0177 | 89.0 | 10.83% | 3755.7 | 7.74% | motif file (matrix) |
svg |
21 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.663e+00 | 0.0221 | 33.0 | 4.01% | 1092.0 | 2.25% | motif file (matrix) |
svg |
22 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.528e+00 | 0.0242 | 48.0 | 5.84% | 1788.2 | 3.69% | motif file (matrix) |
svg |
23 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.487e+00 | 0.0242 | 24.0 | 2.92% | 716.0 | 1.48% | motif file (matrix) |
svg |
24 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -6.422e+00 | 0.0247 | 17.0 | 2.07% | 437.5 | 0.90% | motif file (matrix) |
svg |
25 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -6.343e+00 | 0.0256 | 40.0 | 4.87% | 1431.9 | 2.95% | motif file (matrix) |
svg |
26 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.293e+00 | 0.0259 | 190.0 | 23.11% | 9216.0 | 18.99% | motif file (matrix) |
svg |
27 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.133e+00 | 0.0293 | 74.0 | 9.00% | 3100.7 | 6.39% | motif file (matrix) |
svg |
28 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.013e+00 | 0.0318 | 60.0 | 7.30% | 2418.1 | 4.98% | motif file (matrix) |
svg |
29 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -6.000e+00 | 0.0318 | 24.0 | 2.92% | 743.9 | 1.53% | motif file (matrix) |
svg |
30 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.799e+00 | 0.0368 | 71.0 | 8.64% | 2991.1 | 6.16% | motif file (matrix) |
svg |
31 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.695e+00 | 0.0395 | 50.0 | 6.08% | 1964.0 | 4.05% | motif file (matrix) |
svg |
32 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -5.631e+00 | 0.0408 | 9.0 | 1.09% | 176.3 | 0.36% | motif file (matrix) |
svg |
33 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -5.483e+00 | 0.0458 | 21.0 | 2.55% | 646.8 | 1.33% | motif file (matrix) |
svg |
34 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.222e+00 | 0.0578 | 96.0 | 11.68% | 4361.0 | 8.99% | motif file (matrix) |
svg |
35 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.169e+00 | 0.0592 | 28.0 | 3.41% | 975.2 | 2.01% | motif file (matrix) |
svg |
36 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -5.106e+00 | 0.0612 | 4.0 | 0.49% | 42.1 | 0.09% | motif file (matrix) |
svg |
37 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.059e+00 | 0.0625 | 51.0 | 6.20% | 2082.0 | 4.29% | motif file (matrix) |
svg |
38 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -4.976e+00 | 0.0661 | 10.0 | 1.22% | 231.2 | 0.48% | motif file (matrix) |
svg |
39 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -4.911e+00 | 0.0687 | 73.0 | 8.88% | 3213.0 | 6.62% | motif file (matrix) |
svg |
40 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.892e+00 | 0.0687 | 65.0 | 7.91% | 2806.0 | 5.78% | motif file (matrix) |
svg |
41 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -4.888e+00 | 0.0687 | 46.0 | 5.60% | 1855.1 | 3.82% | motif file (matrix) |
svg |
42 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -4.829e+00 | 0.0693 | 76.0 | 9.25% | 3380.9 | 6.97% | motif file (matrix) |
svg |
43 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.699e+00 | 0.0770 | 31.0 | 3.77% | 1152.5 | 2.38% | motif file (matrix) |
svg |