Information for 7-GAGACAGCAAGGGGAC (Motif 12)

T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
Reverse Opposite:
A T C G A G C T A T G C A T G C A G T C A G T C A C G T A G C T A C T G A G T C A C G T A T C G G A C T A T G C G C A T A T G C
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.721
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif27.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets60.6 +/- 25.6bp
Average Position of motif in Background48.8 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGACAGCAAGGGGAC
--CACAGCGGGGGGTC
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAGCAAGGGGAC
TGAGTCAGCA-------
 A C G T T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGACAGCAAGGGGAC
--CACAGCAGGGGG--
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGACAGCAAGGGGAC
-NCGCAGCGGGGGGTC
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAGACAGCAAGGGGAC
----CAGCC-------
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGACAGCAAGGGGAC
-DCHCAGCAGGRGGCC
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGACAGCAAGGGGAC
---ACATCAAAGGNA-
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGACAGCAAGGGGAC-
NANAGATCAAAGGGNNN
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGACAGCAAGGGGAC
-NCNCAGCGGGGGGTC
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGACAGCAAGGGGAC
--CACAGN--------
 T A C G C G T A A T C G C T G A A T G C G T C A A C T G A G T C C T G A C G T A T A C G C T A G A T C G A T C G T C G A A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T