Information for 7-CRGTRKYKACWCC (Motif 11)

A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G C G A T A T C G A C G T G T A C T C G A G T C A A G T C T C G A A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.5 +/- 26.8bp
Average Position of motif in Background69.3 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CRGTRKYKACWCC-----
--NNGGCGACACCTCNNN
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CRGTRKYKACWCC-----
-ATAAATGACACCTATCA
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CRGTRKYKACWCC-
------TCACACCT
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CRGTRKYKACWCC-
------TGACACCT
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CRGTRKYKACWCC------
--TACGAGACTCCTCTAAC
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CRGTRKYKACWCC-
------TCACACCT
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CRGTRKYKACWCC--
----TTTCACACCTN
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CRGTRKYKACWCC-----
-NNTTTTCACACCTTNNN
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CRGTRKYKACWCC--
BSNTGTTTACWYWGN
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CRGTRKYKACWCC
---TGTTTAC---
 A G T C C T A G A C T G A C G T T C A G A C G T A G C T A C T G C G T A A T G C C G T A A G T C A G T C
A C G T A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C A C G T A C G T A C G T