Information for 5-GCGTGTKCTGGGG (Motif 7)

A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C C T G A C T A G G T A C C G T A A G T C C G T A A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.931
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.3 +/- 28.4bp
Average Position of motif in Background51.8 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGTGTKCTGGGG
TGCGTG--------
 A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGTGTKCTGGGG
--CTGTTCCTGG-
 A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGTKCTGGGG
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTGTKCTGGGG
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GCGTGTKCTGGGG-
--------TGGGGA
 A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGTKCTGGGG
NNCGCGTGNN------
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGTKCTGGGG
TTGCGTGCVA-----
 A C G T A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGTKCTGGGG
GGCGGGGGCGGGGG
 A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGTKCTGGGG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGTGTKCTGGGG---
-RGSMTBCTGGGAAAT
 A C T G A G T C A C T G A C G T C T A G A C G T A C T G A G T C A G C T C T A G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T