Information for 6-GTGGTACCTGCTGCTG (Motif 17)

A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C C G T A A T C G A G T C C G T A T C A G A C T G A C G T C G T A A G T C A G T C C T G A A G T C
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 20.9bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGGTACCTGCTGCTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTGGTACCTGCTGCTG
---CCACCTGTTGCAT
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTACCTGCTGCTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGGTACCTGCTGCTG
-SNGCACCTGCHS---
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGGTACCTGCTGCTG
-ANCCACCTGTTGCNC
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTGGTACCTGCTGCTG
---NCACCTGTN----
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTGGTACCTGCTGCTG
-----AGCAGCTGCT-
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGGTACCTGCTGCTG--
------CCCCCTGCTGTG
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTACCTGCTGCTG
GCTGGGGGGTACCCCTT----
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGGTACCTGCTGCTG
-GGGTACGTGC-----
 A C T G A G C T A C T G A C T G A C G T G T C A A G T C A G T C A C G T A C T G A T G C C G A T A C T G A T G C C G A T A C T G
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T