Information for 3-CAAGSWCGTCCTCGAG (Motif 4)

A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
Reverse Opposite:
T A G C C G A T A G T C A T C G C G T A C T A G A T C G C T G A A G T C C T A G G C T A T A G C A T G C A C G T C G A T A C T G
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.731
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 20.1bp
Average Position of motif in Background78.5 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAAGSWCGTCCTCGAG
TATTCAAGGTCATGCGA---
 A C G T A C G T A C G T A C G T A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAAGSWCGTCCTCGAG
---GCTCGGSCTC---
 A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAAGSWCGTCCTCGAG
NTCAAGGTCA--------
 A C G T A C G T A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAAGSWCGTCCTCGAG
TTCAAGGTCAT-------
 A C G T A C G T A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAAGSWCGTCCTCGAG
-----ACGTCATC---
 A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAAGSWCGTCCTCGAG
BTCAAGGTCA--------
 A C G T A C G T A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CAAGSWCGTCCTCGAG
---CAACGTCCGCGG-
 A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAAGSWCGTCCTCGAG
CAAGGHCANV------
 A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAAGSWCGTCCTCGAG
-----ACTTCCTGNT-
 A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CAAGSWCGTCCTCGAG
TCAAGGTCAT-------
 A C G T A G T C G C T A G T C A A T C G A T C G C G A T A G T C T C A G A G C T A T G C A G T C A C G T A T G C C T A G C G T A A T C G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T