Information for 16-TCAAGACTTGAKA (Motif 20)

A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
Reverse Opposite:
A C G T G T C A A C G T T A G C T C G A G C T A A T C G C G A T A T G C A C G T A C G T T A C G C G T A
p-value:1e-4
log p-value:-1.030e+01
Information Content per bp:1.700
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.0 +/- 1.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCAAGACTTGAKA---
ATAACCACTTGAAAATT
 A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCAAGACTTGAKA
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCAAGACTTGAKA
AAGGTCAAAAGGTCAA-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCAAGACTTGAKA
GAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCAAGACTTGAKA
CGTCTAGACA-----
 A C G T A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCAAGACTTGAKA
---CCACTTGAA-
 A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCAAGACTTGAKA
AAAGGTCAAAAGGTCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCAAGACTTGAKA
-CAAGACGCCTTA
 A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TCAAGACTTGAKA-----
---NNATNTGATANNNNN
 A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCAAGACTTGAKA
ATGAATAATTAATG
 A C G T A C G T A G T C G T C A C G T A T A C G C G T A A T G C C A G T A C G T A T C G G T C A C A G T C G T A
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G