Information for 2-CAGCACGTGC (Motif 2)

T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C
Reverse Opposite:
T C A G T A G C C T G A A G T C C T A G C A G T A T C G A T G C A G C T A T C G
p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.688
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif1248.9
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets53.2 +/- 22.7bp
Average Position of motif in Background49.7 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT/MA0825.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CAGCACGTGC-
-ACCACGTGCC
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T
A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.85
Offset:2
Orientation:forward strand
Alignment:CAGCACGTGC--
--KCACGTGMCN
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T A C G T
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

MAX/MA0058.3/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CAGCACGTGC-
-ACCACGTGCT
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CAGCACGTGC-
-GACACGTGCC
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T
A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CAGCACGTGC
NNCCACGTGG
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

BHLHE40/MA0464.2/Jaspar

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CAGCACGTGC-
-ATCACGTGAC
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T
A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CAGCACGTGC
-ACCACGTG-
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CAGCACGTGC-
-GGCACGTGTC
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T
A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CAGCACGTGC--
CGGCACGTGCCA
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CAGCACGTGC--
TGGCACGTGCCA
 T A G C T C G A T A C G A T G C G T C A G A T C T C A G G A C T A T C G A G T C A C G T A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A