Information for 5-GACRCTCCGA (Motif 19)

A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A
Reverse Opposite:
A C G T A G T C C T A G T A C G G T C A A C T G G A C T C T A G A C G T G T A C
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.744
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif124.2
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets57.4 +/- 26.0bp
Average Position of motif in Background47.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACRCTCCGA
GCCACACCCA
 A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACRCTCCGA--
GCCACRCCCACY
 A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A A C G T A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACRCTCCGA
GCCMCRCCCH
 A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACRCTCCGA-
GGCCACRCCCMK
 A C G T A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACRCTCCGA--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GACRCTCCGA
---GCTCCG-
 A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GACRCTCCGA--
GCCACGCCCACT
 A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A A C G T A C G T
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GACRCTCCGA
GGCCACACCCA
 A C G T A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACRCTCCGA-
GGCCACACCCAN
 A C G T A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GACRCTCCGA-
GCCACGCCCCC
 A C T G T G C A G A T C C T G A A G T C C A G T A T G C G A T C A C T G G T C A A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C