Information for 6-AGCGAGGCGGCTC (Motif 10)

C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G A G T C A G T C A C T G G T A C A T G C A C G T A G T C C T A G A G T C A C G T
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 17.2bp
Average Position of motif in Background80.9 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AGCGAGGCGGCTC
--------NGCTN
 C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:-9
Orientation:forward strand
Alignment:---------AGCGAGGCGGCTC
SMCAGTCWGAKGGAGGAGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCGAGGCGGCTC---
NAGANTGGCGGGGNGNA
 A C G T C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCGAGGCGGCTC-
--GGGGGCGGGGCC
 C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGGCGGCTC
GGGNGGGGGCGGGGC
 A C G T A C G T C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

GLIS1/MA0735.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGGCGGCTC-
GCTTCGTGGGGGGTCT
 A C G T A C G T C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGCGAGGCGGCTC-----
--CGCGCCGGGTCACGTA
 C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAGGCGGCTC-
NNTNAGGGGCGGNNNN
 A C G T A C G T C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.49
Offset:9
Orientation:forward strand
Alignment:AGCGAGGCGGCTC--
---------GCTCCG
 C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGCGAGGCGGCTC---
NNNNATGCGGGTNNNN
 C G T A A C T G A G T C A C T G C G T A A T C G A C T G A G T C A C T G A C T G A G T C A C G T A T G C A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A