| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.282e+01 | 0.0010 | 20.0 | 2.44% | 341.7 | 0.71% | motif file (matrix) |
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| 2 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.094e+01 | 0.0032 | 57.0 | 6.96% | 1855.0 | 3.84% | motif file (matrix) |
svg |
| 3 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-3 | -7.830e+00 | 0.0482 | 87.0 | 10.62% | 3543.8 | 7.34% | motif file (matrix) |
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| 4 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.331e+00 | 0.0596 | 215.0 | 26.25% | 10371.3 | 21.48% | motif file (matrix) |
svg |
| 5 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.786e+00 | 0.0822 | 24.0 | 2.93% | 698.3 | 1.45% | motif file (matrix) |
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| 6 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.071e+00 | 0.1401 | 51.0 | 6.23% | 1972.2 | 4.08% | motif file (matrix) |
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| 7 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.189e+00 | 0.2901 | 85.0 | 10.38% | 3788.4 | 7.85% | motif file (matrix) |
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