Information for 3-CTGGCCGTGA (Motif 7)

A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A
Reverse Opposite:
A C G T A G T C C G T A G A T C A T C G A C T G A G T C A G T C G T C A A C T G
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.829
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif130.6
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets56.3 +/- 24.2bp
Average Position of motif in Background55.7 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCGTGA----
GCTGACCTTGAACTN
 A C G T A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGGCCGTGA-
-TGACCTTGAN
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGGCCGTGA-
-TGACCTTGAV
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGCCGTGA---
-TGACCTTGACCT
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T A C G T A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGGCCGTGA--
----NCGTGACN
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCGTGA
BNTGDCCTTG-
 A C G T A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGGCCGTGA
--GGCVGTTR
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCCGTGA---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGCCGTGA
TTGGCA----
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGCCGTGA---
-TGACCTTGACCT
 A G T C A C G T T C A G A C T G A G T C T A G C C T A G G C A T T C A G G T C A A C G T A C G T A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T