Information for 5-WGGGCCMGSCGGGCWG (Motif 26)

C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
Reverse Opposite:
A G T C C G T A A T C G A G T C A G T C A G T C A C T G A T G C A G T C A C G T A C T G A C T G A G T C A G T C A G T C C G A T
p-value:1e-6
log p-value:-1.404e+01
Information Content per bp:1.897
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 25.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:WGGGCCMGSCGGGCWG
--TGCCCTGAGGGCA-
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:WGGGCCMGSCGGGCWG
--TGCCCTNAGGGCA-
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:WGGGCCMGSCGGGCWG
--TGCCCTNAGGGCA-
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-WGGGCCMGSCGGGCWG
CAGGCCNNGGCCNN---
 A C G T C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:WGGGCCMGSCGGGCWG
-------TNNGGGCAG
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:WGGGCCMGSCGGGCWG
-----CWGGCGGGAA-
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WGGGCCMGSCGGGCWG
GGGGCCCAAGGGGG--
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WGGGCCMGSCGGGCWG
GGGGCTYGKCTGGGA-
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:WGGGCCMGSCGGGCWG--
-NAGANTGGCGGGGNGNA
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WGGGCCMGSCGGGCWG-
--GTCATGCHTGRCTGS
 C G T A A C T G A C T G A C T G A G T C A G T C G T C A A C T G A T C G A G T C A C T G A C T G A C T G A T G C C G A T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C