Information for 13-TGCTGCTTGCATG (Motif 25)

A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T A C T G A G T C C G T A C G T A C T A G A G T C C T G A A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.404e+01
Information Content per bp:1.943
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 22.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGCTGCTTGCATG---
------TTGCGTGCVA
 A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCTGCTTGCATG
ACTTGCTACCTACACC
 A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Foxo1/MA0480.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTGCTTGCATG
TCCTGTTTACA--
 A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCTTGCATG
AGATGCTRCTRCCHT-
 A C G T A C G T A C G T A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGCTGCTTGCATG
--CTGTTTAC---
 A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G
A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGCTGCTTGCATG
--NNACTTGCCTT
 A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCTGCTTGCATG-
----ATTTGCATAA
 A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCTTGCATG-
ATGCATWATGCATRW
 A C G T A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCTTGCATG-
GTCATGCHTGRCTGS
 A C G T A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGCTGCTTGCATG-
----ATTTGCATAT
 A C G T A C T G A G T C G A C T A C T G A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T