Information for 3-TCCTACACVTTCACAC (Motif 19)

A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C
Reverse Opposite:
A C T G A G C T A C T G A C G T A C T G C G T A C T G A A G C T A C T G A G C T C T A G A C G T C G T A A T C G A T C G C T G A
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.762
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.4 +/- 26.7bp
Average Position of motif in Background42.7 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCTACACVTTCACAC---
--GACCACATTCATACAAT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC---
---------TTCACACCTT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC--
----------TCACACCT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC---
--------CTTCACACCTA
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC--
----------TCACACCT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC--
--------TTTCACACCT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC---
------NTTTTCACACCTT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC---
--------TTTCACACCTN
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC--
----------TCACACCT
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:TCCTACACVTTCACAC-
-----------CACGCA
 A G C T A T G C A T G C A C G T G T C A A G T C C T G A A G T C T C G A A G C T G C A T A G T C C G T A A G T C C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A