Information for 8-TCRCAGGAAS (Motif 18)

A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C
Reverse Opposite:
T A C G C A G T C G A T G A T C A G T C A C G T A C T G A G T C A C T G C G T A
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.768
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif231.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets49.4 +/- 26.7bp
Average Position of motif in Background48.2 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCRCAGGAAS
-CACAGN---
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCRCAGGAAS-
-AACAGGAAGT
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCRCAGGAAS--
--ACAGGAAGTG
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCRCAGGAAS--
ANTTCTCAGGAANNN
 A C G T A C G T A C G T A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCRCAGGAAS-
-NACAGGAAAT
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCRCAGGAAS
GTCACATGAY-
 A C G T A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCRCAGGAAS---
-NDCAGGAARTNN
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T A C G T A C G T
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCRCAGGAAS--
--ACAGGAAGTG
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T A C G T
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCRCAGGAAS
HTTTCCCASG---
 A C G T A C G T A C G T A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCRCAGGAAS-
-AACCGGAAGT
 A C G T G T A C C T A G A G T C T G C A A C T G C T A G C G T A G T C A A T G C A C G T
A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T