Information for 6-GGCCAACGTG (Motif 16)

A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G
Reverse Opposite:
T A G C C T G A G T A C A C T G A G C T A C G T C A T G T A C G G T A C T A G C
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.658
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.25%
Number of Background Sequences with motif907.5
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets53.8 +/- 26.3bp
Average Position of motif in Background48.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCCAACGTG
TGCCAA----
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCCAACGTG
CGTGCCAAG---
 A C G T A C G T A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCCAACGTG-
-GGGTACGTGC
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCCAACGTG
----CACGTG
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G
A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGCCAACGTG-
---GGACGTGC
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G A C G T
A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGCCAACGTG-
---RTACGTGC
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCCAACGTG
--NCCACGTG
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCCAACGTG---
NAGGTCACNNTGACC
 A C G T A C G T A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G A C G T A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCCAACGTG-----
TGGGCGACGTCGTTAA
 A C G T A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G A C G T A C G T A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCCAACGTG
AGCCAATCGG
 A T C G C A T G A T G C G T A C T G C A T C G A T G A C C A T G G A C T A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G