Information for 1-GGACGCACAGACGATG (Motif 7)

A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
Reverse Opposite:
A G T C C T G A A G C T G A T C A T C G A C G T A T G C G C A T A C T G A C G T C T A G T A G C A T C G A G C T G A T C T G A C
p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.702
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 25.9bp
Average Position of motif in Background41.2 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGACGCACAGACGATG
AGCGGCACACACGCAA
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGACGCACAGACGATG
CGAAGCACACAAAATA
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGACGCACAGACGATG
------CCAGACRSVB
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGACGCACAGACGATG
-AAACCACAGAN----
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GGACGCACAGACGATG
------CCAGACAG--
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGACGCACAGACGATG
AGAGRRACAGCWGAC-
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGACGCACAGACGATG
------BCAGACWA--
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGACGCACAGACGATG
-----CACAGN-----
 A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Gmeb1/MA0615.1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GGACGCACAGACGATG
NNNTNGTACGTAANNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C A C G T A C G T A C G T A C G T

PB0027.1_Gmeb1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GGACGCACAGACGATG
NNNTNGTACGTAANNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C G A T A G C A T C G A G T C G T C A G T A C C G T A A T C G G T C A A T G C C A T G C T G A G A C T C T A G
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C A C G T A C G T A C G T A C G T