Information for 3-AGCGTGACTCAAT (Motif 4)

C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
Reverse Opposite:
C T G A C A G T A C G T C T A G C G T A A C T G A C G T A G T C C G T A A G T C C A T G A G T C A C G T
p-value:1e-12
log p-value:-2.953e+01
Information Content per bp:1.806
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 22.3bp
Average Position of motif in Background71.4 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGCGTGACTCAAT
-NCGTGACN----
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AGCGTGACTCAAT
----TGACTCA--
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGCGTGACTCAAT
TCAGNGAGCGTGAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCGTGACTCAAT
-GGATGACTCAT-
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCGTGACTCAAT
-GGATGACTCAT-
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGCGTGACTCAAT
---ATGACTCATC
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCGTGACTCAAT
-GGATGACTCATC
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCGTGACTCAAT--
ACCGTGACTAATTNN
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGCGTGACTCAAT
AGGAGATGACTCAT-
 A C G T A C G T C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCGTGACTCAAT
-NNVTGASTCATN
 C G T A A C T G G A T C C T A G C G A T A C T G C G T A A G T C G A C T A G T C T C G A G C T A A G C T
A C G T A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C