Information for 9-CAGGGTGCCT (Motif 23)

A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
Reverse Opposite:
C G T A A T C G A C T G T G A C C G T A A G T C G T A C G A T C G C A T A C T G
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.819
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif438.2
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets54.3 +/- 25.9bp
Average Position of motif in Background49.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGGTGCCT
-AGCGCGCC-
 A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGTGCCT----
NNNGGGGCGCCCCCNN
 A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CAGGGTGCCT
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGGGTGCCT
NRRGGGTCTT
 A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGGGTGCCT
TGTCAGGGGGCG-
 A C G T A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CAGGGTGCCT
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGGGTGCCT
--CGGAGC--
 A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGTGCCT
CACAGCGGGGGGTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGGGTGCCT
CTGGCAGNCTGCCA
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGTGCCT----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A G T C C G T A C T A G A C T G C T A G G C A T A C T G T G A C A T G C G C A T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C