Information for 5-GTAGGGCTTT (Motif 16)

A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T
Reverse Opposite:
T G C A C G T A C G T A A T C G A G T C A G T C A G T C G A C T C G T A A T G C
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif111.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets44.4 +/- 26.5bp
Average Position of motif in Background50.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTAGGGCTTT
--NGGGATTA
 A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTAGGGCTTT
CNAGGCCT--
 A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGGCTTT----
NNATTGGACTTTNGNN
 A C G T A C G T A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTAGGGCTTT
----NGCTN-
 A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGGCTTT-----
NNNTNGGGCGTATNNTN
 A C G T A C G T A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTAGGGCTTT
CTAGGCCT--
 A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTAGGGCTTT--
--GGGGATTTCC
 A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGGGCTTT------
AGAGGGGATTAATTTAT
 A C G T A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTAGGGCTTT------
TGTAGGGATTAATTGTC
 A C G T A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTAGGGCTTT-
---NGGATTAN
 A T C G G C A T C T G A C T A G A C T G A C T G A T G C A C G T C G A T A C G T A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T