Information for 7-CGACBGGAGCAGCTTC (Motif 8)

A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A C G T A C T A G G T A C C G A T A T C G A G T C A G C T A G T C G T A C T A G C A T C G A G C T A T G C A T C G
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.718
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif45.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets41.5 +/- 24.8bp
Average Position of motif in Background45.3 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGACBGGAGCAGCTTC-
--ADGGYAGYAGCATCT
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:11
Orientation:forward strand
Alignment:CGACBGGAGCAGCTTC-
-----------GCTTCC
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CGACBGGAGCAGCTTC-
-------AGCAGCTGCT
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC-
-----NNAGCAGCTGCT
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC-
-------CGCAGCTGCG
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC
----CGGAGC------
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC----
---NNNNAGCAGCTGCTGAN
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC-
----NGNGACAGCTGCN
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC
------CAGCAGCTGN
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGACBGGAGCAGCTTC--
------CAGCTGTTTCCT
 A T G C A T C G C T G A A T G C A T C G A C T G C T A G C T G A C T A G A T G C G C T A A C T G A G T C A C G T A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T