Information for 9-CGGCCATTTG (Motif 18)

A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G
Reverse Opposite:
A T G C G T C A G T C A G T C A C A G T A C T G A C T G A G T C A T G C A C T G
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif67.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets38.1 +/- 22.6bp
Average Position of motif in Background45.2 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CGGCCATTTG
GTCCGCCATTA-
 A C G T A C G T A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCATTTG-
GCNGCCATCTTG
 A C G T A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGCCATTTG--
--GCCATCTGTT
 A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCATTTG-
GCCGCCATCTTG
 A C G T A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGGCCATTTG--
--RCCATMTGTT
 A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCATTTG-----
CCNNACCATCTGGCCTN
 A C G T A C G T A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGGCCATTTG--
--GCCATATGGT
 A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T A C G T
A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGGCCATTTG-
---CCATATGT
 A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGGCCATTTG--
--ACCATATGTT
 A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T A C G T
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGCCATTTG--
--ACCATCTGTT
 A G T C T A C G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A T C G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T