Information for 2-GGACCGGCTGCTG (Motif 6)

A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C T C G A A C T G A G T C C G T A A C T G A G T C G T A C A C T G A T C G A C G T A G T C G T A C
p-value:1e-11
log p-value:-2.733e+01
Information Content per bp:1.804
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif81.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.7 +/- 28.8bp
Average Position of motif in Background48.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGACCGGCTGCTG
--AGCAGCTGCT-
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGACCGGCTGCTG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGACCGGCTGCTG
NNAGCAGCTGCT-
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGACCGGCTGCTG--
-GACCCCCCGCTGTG
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGACCGGCTGCTG
---NCAGCTGCTG
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACCGGCTGCTG---
-GACCCCCCGCTGCGC
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGACCGGCTGCTG---
-GACCCCCCGCTGTGC
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGACCGGCTGCTG
--ANCAGCTG---
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGACCGGCTGCTG-
--NVCAGCTGBBNN
 A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGACCGGCTGCTG
NGNGACAGCTGCN-
 A C G T A C T G A C T G C G T A A T G C A G T C C A T G T A C G A G T C C G A T A C T G A G T C A C G T A T C G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T