Information for 3-RTCCCCCTGT (Motif 5)

C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T
Reverse Opposite:
T G C A T G A C T C G A T C A G A T C G T A C G C T A G T A C G C T G A G A T C
p-value:1e-12
log p-value:-2.852e+01
Information Content per bp:1.611
Number of Target Sequences with motif180.0
Percentage of Target Sequences with motif19.31%
Number of Background Sequences with motif5358.4
Percentage of Background Sequences with motif11.22%
Average Position of motif in Targets48.3 +/- 25.3bp
Average Position of motif in Background50.0 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0204.1_Zfp740_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---RTCCCCCTGT----
AAATTCCCCCCGGAAGT
 A C G T A C G T A C G T C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:RTCCCCCTGT
-TCCCCA---
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RTCCCCCTGT-----
GACCCCCCGCTGTGC
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:RTCCCCCTGT----
GACCCCCCGCTGTG
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RTCCCCCTGT-----
GACCCCCCGCTGCGC
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----RTCCCCCTGT--
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C G T C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RTCCCCCTGT----
GACCCCCCGCGAAG
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----RTCCCCCTGT---
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T A C G T C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RTCCCCCTGT-----
CCCCCCCGGGGGGGT
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:RTCCCCCTGT-----
CCCCCCCGGGGGGGT
 C T A G G A C T A T G C G A T C A T G C T A G C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T