p-value: | 1e-13 |
log p-value: | -3.023e+01 |
Information Content per bp: | 1.876 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 2.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 71.0 +/- 12.0bp |
Average Position of motif in Background | 46.5 +/- 26.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGYSCAGRGTGCM CANAGNNCAAAGTCCA |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGYSCAGRGTGCM AGAGTCCAAAGTCCA |
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MTF1/MA0863.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGYSCAGRGTGCM-- -GTGCCGTGTGCAAA |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGYSCAGRGTGCM- NNNANTGCAGTGCNNTT |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGYSCAGRGTGCM TAGGGCAAAGGTCA |
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PB0044.1_Mtf1_1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGYSCAGRGTGCM---- -GGGCCGTGTGCAAAAA |
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ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGYSCAGRGTGCM- NAGGTCACNNTGACC |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGYSCAGRGTGCM GTAGGGCAAAGGTCA |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGYSCAGRGTGCM TGCCCAGNHW--- |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGYSCAGRGTGCM AGGGGTCAGAGGTCA |
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