Information for 10-ACATCCAGGCAAC (Motif 16)

G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T C A A C G T A C T G A C G T
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 17.9bp
Average Position of motif in Background47.7 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACATCCAGGCAAC--
---SCCTAGCAACAG
 G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACATCCAGGCAAC
TACATCCGGGT---
 A C G T G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACATCCAGGCAAC
NNCTTCCNGGAAGN
 A C G T G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACATCCAGGCAAC
NNNCTTTCCAGGAAA-
 A C G T A C G T A C G T G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACATCCAGGCAAC
-TTTCCNGGAAAN
 G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACATCCAGGCAAC
-CTTCCNGGAA--
 G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACATCCAGGCAAC
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACATCCAGGCAAC---
-----AAGGCAAGTGT
 G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACATCCAGGCAAC-
TGTTKCCTAGCAACM
 A C G T G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACATCCAGGCAAC
ACATCCTGNT---
 G T C A A G T C C G T A A C G T G T A C A G T C G T C A A C T G A C T G G T A C C G T A C G T A A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T