Information for 2-CCAGCTCAMGCCGCAG (Motif 12)

A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C T G A C T G A G T C A C G T C G A T A C T G C T G A A C T G A G T C A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 19.5bp
Average Position of motif in Background44.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG
-------AAACCGCAA
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAGCTCAMGCCGCAG--
-------AAACCACAGAN
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG
--CNGTCACGCCAC--
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G
A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG-
-------AAACCGCAAA
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG
------NAAACCACAG
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG---
--------AGCCTCAGGCA
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CCAGCTCAMGCCGCAG-
-------AAACCACAGC
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG----
-----CCACACAGCAGGAGA
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CCAGCTCAMGCCGCAG----
------CAGGCCNNGGCCNN
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:CCAGCTCAMGCCGCAG-
-------AAACCACANN
 A G T C G T A C C G T A C T A G A G T C A G C T A G T C C G T A T G A C C T A G A G T C A G T C A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A