Information for 2-ATCCCTGCTG (Motif 5)

G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A G T C C G T A T A C G A C T G C A T G C T G A A C G T
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.726
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.17%
Number of Background Sequences with motif599.9
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets46.7 +/- 24.8bp
Average Position of motif in Background47.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ATCCCTGCTG--
CCCCCTGCTGTG
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATCCCTGCTG-----
TNTCCTGCTGTGNNG
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ATCCCTGCTG---
---CCTGCTGAGH
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATCCCTGCTG-----
TCNCCTGCTGNGNNN
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATCCCTGCTG-----
NNTCCTGCTGTGNNN
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATCCCTGCTG---
---CCAGCTGTTN
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ATCCCTGCTG---
---HCAGCTGDTN
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.67
Offset:6
Orientation:forward strand
Alignment:ATCCCTGCTG--
------GCTGTG
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:ATCCCTGCTG--
----CAGCTGNT
 G T C A G A C T G T A C G T A C A T G C C G A T T C A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T