Information for 21-CCCAAAGAAC (Motif 55)

A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.2 +/- 22.6bp
Average Position of motif in Background76.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCAAAGAAC----
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCAAAGAAC
TTCCKNAGAA-
 A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCAAAGAAC---
TATCATTAGAACGCT
 A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

Vdr/MA0693.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCCAAAGAAC--
TGAACTCNATGAACTC
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCAAAGAAC-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCCAAAGAAC-
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Stat6/MA0520.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCAAAGAAC-
CATTTCCTGAGAAAT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCCAAAGAAC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCCAAAGAAC--
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCCAAAGAAC---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A