Information for 20-CGCCTGAGCG (Motif 53)

T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
Reverse Opposite:
G A T C C T A G T A G C G A C T G T A C C G T A A T C G A C T G A G T C A C T G
p-value:1e-5
log p-value:-1.279e+01
Information Content per bp:1.672
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.49%
Number of Background Sequences with motif281.8
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets51.1 +/- 25.1bp
Average Position of motif in Background47.6 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCCTGAGCG
GCGCCTGCGCA
 A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGAGCG
NCACGTGACN-
 A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGAGCG
NNCACCTGNN--
 A C G T A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGAGCG
CCTCACCTG----
 A C G T A C G T A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGAGCG-
GCGCATGCGCAC
 A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCCTGAGCG---
--CTTGAGTGGCT
 T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCTGAGCG-
TGCGTGGGCGT
 T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGAGCG
AACACCTGCT--
 A C G T A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGAGCG
CTGCGCATGCGC-
 A C G T A C G T A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGAGCG-
TCACGTGACCGG
 A C G T T G A C T C A G A G T C T A G C C G A T A C T G C T G A A T C G G A T C C T A G A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G