Information for 19-GAAAGAGAAG (Motif 52)

A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.322e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.3 +/- 30.3bp
Average Position of motif in Background54.5 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAAGAGAAG--
GAAAGTGAAAGT
 A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAAAGAGAAG--
GAAACTGAAACT
 A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF7/MA0772.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAAAGAGAAG--
ACGAAAGCGAAAGT
 A C G T A C G T A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAAGAGAAG-------
GGAAAGCGAAACCAAAAC
 A C G T A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGAGAAG------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAAGAGAAG--
GAAASYGAAASY
 A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAAGAGAAG--
GRAASTGAAAST
 A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGAGAAG----
GGAAANTGAAACTNA
 A C G T A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAAGAGAAG--
GAAAMTGAAACT
 A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAAAGAGAAG--
-ANAGATAAGAA
 A C T G C G T A C G T A C G T A C T A G C G T A A C T G C G T A C G T A A C T G A C G T A C G T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A