p-value: | 1e-13 |
log p-value: | -3.024e+01 |
Information Content per bp: | 1.772 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 0.88% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.3 +/- 25.9bp |
Average Position of motif in Background | 82.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -MATASTATGC---- CCATTGTATGCAAAT |
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PB0208.1_Zscan4_2/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --MATASTATGC---- NNNNTTGTGTGCTTNN |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---MATASTATGC-- NNTCCTGCTGTGNNN |
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Arid5a/MA0602.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------MATASTATGC NNTNNCAATATTAG-- |
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PB0002.1_Arid5a_1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------MATASTATGC NNTNNCAATATTAG-- |
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PH0152.1_Pou6f1_2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---MATASTATGC---- AAACATAATGAGGTTGC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---MATASTATGC-- TNTCCTGCTGTGNNG |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----MATASTATGC- NNNCCATTGTGTNAN |
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POU6F2/MA0793.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | MATASTATGC- -NTAATGAGCT |
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PH0151.1_Pou6f1_1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---MATASTATGC---- GACGATAATGAGCTTGC |
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