Information for 17-AAATTTTCGAGCA (Motif 27)

C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
Reverse Opposite:
A C G T A C T G A T G C A C G T A G T C A C T G C G T A C T G A C T G A C T G A A C G T A G C T A C G T
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.837
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 24.1bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAATTTTCGAGCA--
NAATTTTACGAGNTNN
 A C G T C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAATTTTCGAGCA--
ANATTTTACGAGNNNN
 A C G T C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAATTTTCGAGCA
GAANGTTCTAGAA
 C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAATTTTCGAGCA-----
--TCTTTCGAGGAATTTG
 C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAATTTTCGAGCA
-GRTGMTRGAGCC
 C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAATTTTCGAGCA
-NTTTTACGAGN-
 C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAATTTTCGAGCA
GAACGTTCTAGAA
 C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAATTTTCGAGCA
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAATTTTCGAGCA-
NNAATTCTCGNTNAN
 A C G T C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAATTTTCGAGCA
ANTTTTACGACC-
 C G T A C T G A C G T A A G C T A G C T A G C T A C G T G T A C C T A G C G T A A T C G A G T C G T C A
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T