Information for 13-KGGAAAAAAGAGA (Motif 24)

C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
Reverse Opposite:
A G C T A G T C A C G T A G T C C G A T A C G T A C G T A G C T A C G T A G C T A G T C A G T C G T A C
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.766
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.0 +/- 28.3bp
Average Position of motif in Background65.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:KGGAAAAAAGAGA
TGGAAAA------
 C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KGGAAAAAAGAGA
-GGAACAAAGR--
 C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:KGGAAAAAAGAGA-
--GWAAYHTGAKMC
 C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--KGGAAAAAAGAGA
NATGGAAAAN-----
 A C G T A C G T C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:KGGAAAAAAGAGA-
--GWAAYHTGABMC
 C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--KGGAAAAAAGAGA
AATGGAAAAT-----
 A C G T A C G T C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--KGGAAAAAAGAGA
NNTGGAAANN-----
 A C G T A C G T C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---KGGAAAAAAGAGA
TACTGGAAAAAAAA--
 A C G T A C G T A C G T C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--KGGAAAAAAGAGA
AATGGAAAAT-----
 A C G T A C G T C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---KGGAAAAAAGAGA
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T C A T G C T A G A C T G T C G A C G T A C T G A G T C A T G C A C G T A A C T G C G T A T C A G T C G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T