Information for 7-ACGTCTGGCC (Motif 21)

T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C
Reverse Opposite:
A C T G C T A G A T G C A G T C C T G A A C T G G C T A A G T C A C T G A G C T
p-value:1e-10
log p-value:-2.426e+01
Information Content per bp:1.837
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif29.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.4 +/- 28.6bp
Average Position of motif in Background41.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACGTCTGGCC
VBSYGTCTGG--
 A C G T A C G T T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACGTCTGGCC
CTGTCTGG--
 T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ACGTCTGGCC---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACGTCTGGCC-
-GGTCTGGCAT
 T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACGTCTGGCC
AACATCTGGA-
 A C G T T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ACGTCTGGCC--
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZBTB18/MA0698.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACGTCTGGCC-
NAACATCTGGATN
 A C G T A C G T T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C A C G T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACGTCTGGCC---
-TGTCTGDCACCT
 T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACGTCTGGCC-
-CGTCTAGACA
 T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACGTCTGGCC
TWGTCTGV--
 T C G A G T A C T C A G C A G T A G T C A G C T A C T G A T C G A G T C G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T