Information for 1-GCCRAGACCAGGACCA (Motif 2)

C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A
Reverse Opposite:
A G C T A T C G A C T G A C G T A T G C A G T C G A C T A C T G T A C G G A C T A T G C A G C T A G T C A C T G T C A G A G T C
p-value:1e-16
log p-value:-3.694e+01
Information Content per bp:1.664
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.4 +/- 22.5bp
Average Position of motif in Background22.6 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCRAGACCAGGACCA
TCCCAGMCRAGCCCC-
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA----
-----GACCACGCCCTTATT
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA-
-------CCAGGAACAG
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA---
----TGACANARRCCAGRC
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA
-----GGGCGGGACC-
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA
-CAAAGGTCAG-----
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA-------
------CATAAGACCACCATTAC
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GCCRAGACCAGGACCA
ATGCCCGGGCATGT----
 A C G T A C G T C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GCCRAGACCAGGACCA--
--GGGGTCAAAGTCCAAT
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A A C G T A C G T
A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GCCRAGACCAGGACCA---
----GGGCGATGACCAYTC
 C T A G A G T C G T A C T C A G T C G A A T C G C T G A A T G C G T A C C T G A C T A G T A C G T G C A T A G C A T G C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C