Information for 4-AGGATGCCTS (Motif 12)

T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G
Reverse Opposite:
T A G C C T G A C T A G C A T G A T G C G T C A G A C T G A T C A G T C A G C T
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.620
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif120.2
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets53.9 +/- 26.3bp
Average Position of motif in Background48.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGATGCCTS-
---AGGCCTNG
 T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGATGCCTS--
---ATGCCCACC
 T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGATGCCTS---
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGGATGCCTS-
---AGGCCTAG
 T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGATGCCTS-
-RCATTCCWGG
 T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGATGCCTS-----
GGGTGTGCCCAAAAGG
 A C G T T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGATGCCTS--
---ATGCCAACC
 T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGATGCCTS-
GGGGATTCCCCC
 A C G T T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGATGCCTS-
-RYHYACCTGB
 T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGATGCCTS---
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T T C G A T C A G C T A G C T G A C A G T T A C G G T A C A G T C G A C T A T C G A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C