Information for 3-AGCCTAGGGC (Motif 11)

T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C
Reverse Opposite:
A C T G G A T C A T G C A G T C G A C T G T C A T A C G T A C G T G A C A C G T
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.682
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif11.31%
Number of Background Sequences with motif556.3
Percentage of Background Sequences with motif5.32%
Average Position of motif in Targets51.6 +/- 24.1bp
Average Position of motif in Background50.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGCCTAGGGC-
NGCCTGAGGCN
T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGCCTAGGGC-
NGCCTNAGGCN
T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGCCTAGGGC-
TGCCTGAGGCN
T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGGGC---
ATTGCCTGAGGCAAT
A C G T A C G T T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGGGC---
ATTGCCTCAGGCAAT
A C G T A C G T T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGCCTAGGGC---
-SCCTSAGGSCAW
T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T A C G T A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGGGC---
ATTGCCTGAGGCGAA
A C G T A C G T T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCTAGGGC
CAGCC------
A C G T T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGGGC---
ATTCCCTGAGGGGAA
A C G T A C G T T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCCTAGGGC
ATGCCCTGAGGC
A C G T A C G T T G C A A C T G A T G C A G T C C A G T C T G A T C A G T A C G C T A G T G A C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C