Information for 7-GAGAAAAAAAAAAAAA (Motif 27)

T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
Reverse Opposite:
C A G T A C G T A C G T A C G T A C G T A G C T A G C T A G C T A G C T A G C T A C G T A G C T A G C T G A T C C G A T A T G C
p-value:1e-3
log p-value:-7.198e+00
Information Content per bp:1.808
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif38.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.3 +/- 24.7bp
Average Position of motif in Background65.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GAGAAAAAAAAAAAAA-
GTTAAAAAAAAAAATTA
 T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGAAAAAAAAAAAAA
-AACAAACAACAAGAG
 T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGAAAAAAAAAAAAA-
---AAATAAGAAAAAAC
 T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGAAAAAAAAAAAAA-
GTTCAAAAAAAAAATTC
 T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGAAAAAAAAAAAAA
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGAAAAAAAAAAAAA
AGCCGAAAAAAAAAT---
 A C G T A C G T T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGAAAAAAAAAAAAA
-CAAAAGTAAACAAAG
 T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGAAAAAAAAAAAAA
---AAACAAACATTC-
 T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAGAAAAAAAAAAAAA
NNCCTGNAAAAAAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GAGAAAAAAAAAAAAA
NNCCTGNAAAAAAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T A G C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C G T A G T C A T C G A G C T A
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A A C G T