Information for 9-HCCTGGTCAGGTT (Motif 14)

G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C A G T C A C G T A C T G C G T A A T G C A G T C C G T A A C T G A C T G C A T G
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.899
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 21.7bp
Average Position of motif in Background27.5 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:HCCTGGTCAGGTT--
---GKVTCADRTTWC
 G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---HCCTGGTCAGGTT
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--HCCTGGTCAGGTT
CCCCCTGCTGTG---
 A C G T A C G T G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-HCCTGGTCAGGTT
WDNCTGGGCA----
 A C G T G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:HCCTGGTCAGGTT
---AGGTCA----
 G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:HCCTGGTCAGGTT--
---GKMTCADRTTWC
 G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----HCCTGGTCAGGTT
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---HCCTGGTCAGGTT-
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:HCCTGGTCAGGTT-
---TGCTGTGATTT
 G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---HCCTGGTCAGGTT
ACATCCTGNT------
 A C G T A C G T A C G T G A T C A G T C A G T C A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A C G T A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T