Information for 5-TTAAKTGGTG (Motif 12)

A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G
Reverse Opposite:
G T A C C G T A A G T C A G T C G T C A G T C A C G A T A C G T C G T A C T G A
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.885
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif58.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets60.9 +/- 27.8bp
Average Position of motif in Background45.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTAAKTGGTG
TTAAGTGGT-
 A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTAAKTGGTG---
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTAAKTGGTG
TTAAGTGGN-
 A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTAAKTGGTG---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTAAKTGGTG---
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0005.1_Barhl1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTAAKTGGTG---
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAKTGGTG--
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAKTGGTG--
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTAAKTGGTG---
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAKTGGTG--
ATTCNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T C A T G A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T