Information for 3-AAGCCTGGGAAACTCC (Motif 10)

C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C
Reverse Opposite:
C T A G A T C G C G T A A C T G A G C T A C G T C A G T A G T C A G T C A G T C G C T A C A T G C T A G A G T C G C A T A G C T
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.738
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 21.6bp
Average Position of motif in Background47.4 +/- 46.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:AAGCCTGGGAAACTCC-
-------GGAAATTCCC
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGCCTGGGAAACTCC
---CSTGGGAAAD---
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:AAGCCTGGGAAACTCC-
-------GGAAATTCCC
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AAGCCTGGGAAACTCC-
-------GGAAANCCCC
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGCCTGGGAAACTCC
-WDNCTGGGCA-----
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AAGCCTGGGAAACTCC--
------GGGAAATCCCCN
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AAGCCTGGGAAACTCC-
-------GGAAATCCCC
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAGCCTGGGAAACTCC
ACATGCCCGGGCAT----
 A C G T A C G T C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAGCCTGGGAAACTCC
---SCCTAGCAACAG-
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AAGCCTGGGAAACTCC------
-----TACGAGACTCCTCTAAC
 C T G A C G T A C T A G A G T C G A T C C G A T C T A G C T A G C T A G G T C A C G T A C T G A G T A C A C G T A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C