Information for 5-GGTTTAGTCTTGC (Motif 5)

A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C G T A T C A G C G T A A T G C A C G T G T C A C G T A C G T A G A T C G T A C
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.814
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 23.5bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTAGTCTTGC-
NNAATTAGTCACGGT
 A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTTTAGTCTTGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGTTTAGTCTTGC
TGAACCGGATTAATGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GGTTTAGTCTTGC
TGAACCGGATTAATGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTAGTCTTGC
NGGGATTA-------
 A C G T A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTAGTCTTGC
NNGTANTGTTTTNC
 A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTAGTCTTGC
GGGATTANN-----
 A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTTTAGTCTTGC---
NNTTTTGTTTTGATNT
 A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGTTTAGTCTTGC
CTTTGTTTACTTTTN-
 A C G T A C G T A C G T A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTTTAGTCTTGC
TGTTTACTTT---
 A C T G C A T G C G A T C G A T A C G T C G T A A T C G A C G T A G T C C G A T A C G T A C T G A G T C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T