Information for 3-CTCTGTAAWCTGA (Motif 4)

A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
Reverse Opposite:
G C A T A T G C C G T A A C T G C G A T A G C T A C G T C T G A A G T C C G T A A C T G G T C A A T C G
p-value:1e-14
log p-value:-3.224e+01
Information Content per bp:1.807
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.0 +/- 19.0bp
Average Position of motif in Background57.9 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTCTGTAAWCTGA---
----GWAAYHTGABMC
 A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTAAWCTGA
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTAAWCTGA
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTAAWCTGA
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCTGTAAWCTGA---
----GWAAYHTGAKMC
 A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTCTGTAAWCTGA
AATCGCACTGCATTCCG-
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTAAWCTGA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTAAWCTGA
GGTCTGGCAT----
 A C G T A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTGTAAWCTGA-
---TGTAAACAGGA
 A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A A C G T
A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCTGTAAWCTGA
----GTAAACAG-
 A T G C A C G T A G T C A C G T A C T G G A C T C G T A C T G A G C T A T A G C A C G T A T C G C G T A
A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T