Information for 12-TAGCCCAGCC (Motif 23)

A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C
Reverse Opposite:
C T A G A T C G A G T C A G C T A C T G A C T G C A T G G A T C C G A T T C G A
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.830
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif211.8
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets43.5 +/- 23.8bp
Average Position of motif in Background52.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TAGCCCAGCC-
-TGCCCAGNHW
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGCCCAGCC---
-GGCCCCGCCCCC
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T A C G T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGCCCAGCC--
----BCAGACWA
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAGCCCAGCC----
NAGCCCCGCCCCCN
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TAGCCCAGCC--
----CCAGACAG
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGCCCAGCC------
CAAATCCAGACATCACA
 A C G T A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TAGCCCAGCC
-----CAGCC
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TAGCCCAGCC-------
--TCCCAGMCRAGCCCC
 A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGCCCAGCC------
TAAGCCACGCCCCCTTT
 A C G T A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGCCCAGCC------
TACGCCCCGCCACTCTG
 A C G T A G C T C G T A C A T G G A T C A G T C G T A C C T G A A C T G T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G